Release 0.4.0
--Improved denom INDEL calling algorithm.
--new SNPs/short INDELs calling model
--default support version for SOAPdenovo is changed to SOAPdenovo2 r223. The main difference is the command name is different. 
--Fix a bug in DENOM's varcall. When the long indel file contains some conflicted entries, DENOM crashed.  


Release 0.3.3
-- In some system, stampy/bwa/maq part failed to produce bam files due to high memory fingerprint when system usage is quite high.
   The bash scripts have been changed to facilite IMR_DENOM to check whether alignement has been finished successfully.
   (This  paved the path for IMR/DENOM cluster version)
-- Error recovery is now much more powerful.Even your current alignment only finshed several lanes and some lanes have not been
    alignment at all, you can still use --imrstartfrommerge to resume you job. imr will begin with aligning the absent/unfinished one.  
-- The imrcollect function now supports multi-threading, much faster
-- fix a bug in coarse2cured 
-- fixed bug in DENOM fasiege function
 

Release 0.3.2
============
-- script bootstrap is added in for downloading necessary softwares to $IMR_DENOM/external folder
-- two options for stamp.py --overwrite and --bwa are now used. From now on, IMR/DENOM only support stampy version1.0.14+


Release 0.3.1
============
-- single-command mode and script are implemented


Release 0.3.0
=============
- First public release of pre-compiled binaries
